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pp53 ser15 cell signaling  (Cell Signaling Technology Inc)


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    Structured Review

    Cell Signaling Technology Inc pp53 ser15 cell signaling
    Pp53 Ser15 Cell Signaling, supplied by Cell Signaling Technology Inc, used in various techniques. Bioz Stars score: 97/100, based on 7745 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/pp53+ser15+cell+signaling/Phospho-p38+MAPK+(Thr180%2FTyr182)+Antibody/pmc10104783__41556_2023_1096_MOESM1_ESM-38-218-220
    Average 97 stars, based on 7745 article reviews
    pp53 ser15 cell signaling - by Bioz Stars, 2026-10
    97/100 stars

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    Chromatin Immunoprecipitation:

    Article Title:
    Article Snippet: .. If you are not sure if a list item applies to your research, read the appropriate section before selecting a response. ary M arch 2021 Materials & experimental systems n/a Involved in the study Antibodies Eukaryotic cell lines Palaeontology and archaeology Animals and other organisms Clinical data Dual use research of concern Methods n/a Involved in the study ChIP-seq Flow cytometry MRI-based neuroimaging Antibodies Antibodies used gH2AX (Ser139) Abcam ab11174 gH2AX (Ser139) Millipore 05-636 53BP1 Bethyl A303-906A 53BP1 Novus NB100-304 ACE2 Abcam ab15348 ATM Abcam ab32420 ATR Santa Cruz sc-1887 Beclin 1 Bethyl A302-566A-T Beta-actin Sigma-Aldrich A2228 BrdU BDbioscience 347580 CD68 Abcam ab125212 CDT1 Cell Signaling #8064 cGAS Cell Signaling #15102 CHK1 Novus NB100-46 CHK1 (2G1D5) Cell Signaling #2360 CHK1 (ST57-09) ThermoFisher MA532180 CHK2 Millipore 05-649 Cleaved Caspase-3 (Asp 175) Cell Signaling 9661 DNA-PK Abcam ab32566 HA-tag Abcam ab236632 Histone H3 Abcam ab10799 Human Cytokeratin 8/18 (EP17/EP30) Dako M3652 ISceI (FL-86) Santa Cruz sc-98269 KAP1 Abcam ab10484 LC3B Sigma-Aldrich L7543 p16 Abcam ab51243 p21 Abcam ab188224 P21 Cell Signaling #2946 P38 MAPK Cell Signaling #9212 P53 Abcam ab1101 p62 Abcam ab240635 pATM (Ser1981) Rockland 200-301-400 pATR (T1989) Abcam ab223258 pCHK1 (S317) Cell Signaling #2344 pCHK2 (Thr68) Cell Signaling #2661 PCNA Bio Rad MCA1558 pDNA-PK (Ser2056) (EPR5670) Abcam ab124918 pKAP1 (S824) Bethyl A300-767A pP38 MAPK (Thr180/Tyr182) Cell Signaling #9211 pP53 (Ser15) Cell Signaling #9284 proSP-C Abcam ab3786 pRPA (S4/S8) Bethyl A300-245A pSTAT1 (Ser 727) Cell Signaling #9177 pSTAT1 (Tyr 701) (58D6) Cell Signaling #9167 RPA Calbiochem NA18-100UG RRM1 Santa Cruz sc-11733 RRM2 Novus NBP1-31661 RRM2 Santa Cruz sc-10844 SARS-CoV2 nucleocapsid Sino Biological 40588-T62 SARS-CoV2 nucleocapsid Sino Biological 40143-R019 SARS-CoV2 nucleocapsid (1A6) ThermoFisher MA5-35941 STAT1 (9H2) Cell Signaling #9176 Strep-tag II epitope Qiagen 34850 Tubulin Sigma-Aldrich T5168 Ubiquitin (P4D1) Santa Cruz sc-8017 Vinculin Sigma-Aldrich V9131 Cy3 D/M Jackson 715-165-150 Cy3 D/R Jackson 711-165-152 Cy3 D/G Jackson 705-165-147 4 nature portfolio | reporting sum m ary M arch 2021 A488 D/M ThermoFisher A21202 A488 D/R ThermoFisher A21206 A488 D/G ThermoFisher A11055 A647 D/M ThermoFisher A31571 A647 D/R ThermoFisher A31573 A647 D/G ThermoFisher A21447 Validation All antibodies were validated by the manufacturer and were previously used in peer reviewed works. ..

    Article Title: SARS-CoV-2 infection induces DNA damage, through CHK1 degradation and impaired 53BP1 recruitment, and cellular senescence.
    Article Snippet: .. 3 nature portfolio | reporting sum m ary M arch 2021 Materials & experimental systems n/a Involved in the study Antibodies Eukaryotic cell lines Palaeontology and archaeology Animals and other organisms Clinical data Dual use research of concern Methods n/a Involved in the study ChIP-seq Flow cytometry MRI-based neuroimaging Antibodies Antibodies used gH2AX (Ser139) Abcam ab11174 gH2AX (Ser139) Millipore 05-636 53BP1 Bethyl A303-906A 53BP1 Novus NB100-304 ACE2 Abcam ab15348 ATM Abcam ab32420 ATR Santa Cruz sc-1887 Beclin 1 Bethyl A302-566A-T Beta-actin Sigma-Aldrich A2228 BrdU BDbioscience 347580 CD68 Abcam ab125212 CDT1 Cell Signaling #8064 cGAS Cell Signaling #15102 CHK1 Novus NB100-46 CHK1 (2G1D5) Cell Signaling #2360 CHK1 (ST57-09) ThermoFisher MA532180 CHK2 Millipore 05-649 Cleaved Caspase-3 (Asp 175) Cell Signaling 9661 DNA-PK Abcam ab32566 HA-tag Abcam ab236632 Histone H3 Abcam ab10799 Human Cytokeratin 8/18 (EP17/EP30) Dako M3652 ISceI (FL-86) Santa Cruz sc-98269 KAP1 Abcam ab10484 LC3B Sigma-Aldrich L7543 p16 Abcam ab51243 p21 Abcam ab188224 P21 Cell Signaling #2946 P38 MAPK Cell Signaling #9212 P53 Abcam ab1101 p62 Abcam ab240635 pATM (Ser1981) Rockland 200-301-400 pATR (T1989) Abcam ab223258 pCHK1 (S317) Cell Signaling #2344 pCHK2 (Thr68) Cell Signaling #2661 PCNA Bio Rad MCA1558 pDNA-PK (Ser2056) (EPR5670) Abcam ab124918 pKAP1 (S824) Bethyl A300-767A pP38 MAPK (Thr180/Tyr182) Cell Signaling #9211 pP53 (Ser15) Cell Signaling #9284 proSP-C Abcam ab3786 pRPA (S4/S8) Bethyl A300-245A pSTAT1 (Ser 727) Cell Signaling #9177 pSTAT1 (Tyr 701) (58D6) Cell Signaling #9167 RPA Calbiochem NA18-100UG RRM1 Santa Cruz sc-11733 RRM2 Novus NBP1-31661 RRM2 Santa Cruz sc-10844 SARS-CoV2 nucleocapsid Sino Biological 40588-T62 SARS-CoV2 nucleocapsid Sino Biological 40143-R019 SARS-CoV2 nucleocapsid (1A6) ThermoFisher MA5-35941 STAT1 (9H2) Cell Signaling #9176 Strep-tag II epitope Qiagen 34850 Tubulin Sigma-Aldrich T5168 Ubiquitin (P4D1) Santa Cruz sc-8017 Vinculin Sigma-Aldrich V9131 Cy3 D/M Jackson 715-165-150 Cy3 D/R Jackson 711-165-152 Cy3 D/G Jackson 705-165-147 4 nature portfolio | reporting sum m ary M arch 2021 A488 D/M ThermoFisher A21202 A488 D/R ThermoFisher A21206 A488 D/G ThermoFisher A11055 A647 D/M ThermoFisher A31571 A647 D/R ThermoFisher A31573 A647 D/G ThermoFisher A21447 Validation All antibodies were validated by the manufacturer and were previously used in peer reviewed works. ..

    Flow Cytometry:

    Article Title:
    Article Snippet: .. If you are not sure if a list item applies to your research, read the appropriate section before selecting a response. ary M arch 2021 Materials & experimental systems n/a Involved in the study Antibodies Eukaryotic cell lines Palaeontology and archaeology Animals and other organisms Clinical data Dual use research of concern Methods n/a Involved in the study ChIP-seq Flow cytometry MRI-based neuroimaging Antibodies Antibodies used gH2AX (Ser139) Abcam ab11174 gH2AX (Ser139) Millipore 05-636 53BP1 Bethyl A303-906A 53BP1 Novus NB100-304 ACE2 Abcam ab15348 ATM Abcam ab32420 ATR Santa Cruz sc-1887 Beclin 1 Bethyl A302-566A-T Beta-actin Sigma-Aldrich A2228 BrdU BDbioscience 347580 CD68 Abcam ab125212 CDT1 Cell Signaling #8064 cGAS Cell Signaling #15102 CHK1 Novus NB100-46 CHK1 (2G1D5) Cell Signaling #2360 CHK1 (ST57-09) ThermoFisher MA532180 CHK2 Millipore 05-649 Cleaved Caspase-3 (Asp 175) Cell Signaling 9661 DNA-PK Abcam ab32566 HA-tag Abcam ab236632 Histone H3 Abcam ab10799 Human Cytokeratin 8/18 (EP17/EP30) Dako M3652 ISceI (FL-86) Santa Cruz sc-98269 KAP1 Abcam ab10484 LC3B Sigma-Aldrich L7543 p16 Abcam ab51243 p21 Abcam ab188224 P21 Cell Signaling #2946 P38 MAPK Cell Signaling #9212 P53 Abcam ab1101 p62 Abcam ab240635 pATM (Ser1981) Rockland 200-301-400 pATR (T1989) Abcam ab223258 pCHK1 (S317) Cell Signaling #2344 pCHK2 (Thr68) Cell Signaling #2661 PCNA Bio Rad MCA1558 pDNA-PK (Ser2056) (EPR5670) Abcam ab124918 pKAP1 (S824) Bethyl A300-767A pP38 MAPK (Thr180/Tyr182) Cell Signaling #9211 pP53 (Ser15) Cell Signaling #9284 proSP-C Abcam ab3786 pRPA (S4/S8) Bethyl A300-245A pSTAT1 (Ser 727) Cell Signaling #9177 pSTAT1 (Tyr 701) (58D6) Cell Signaling #9167 RPA Calbiochem NA18-100UG RRM1 Santa Cruz sc-11733 RRM2 Novus NBP1-31661 RRM2 Santa Cruz sc-10844 SARS-CoV2 nucleocapsid Sino Biological 40588-T62 SARS-CoV2 nucleocapsid Sino Biological 40143-R019 SARS-CoV2 nucleocapsid (1A6) ThermoFisher MA5-35941 STAT1 (9H2) Cell Signaling #9176 Strep-tag II epitope Qiagen 34850 Tubulin Sigma-Aldrich T5168 Ubiquitin (P4D1) Santa Cruz sc-8017 Vinculin Sigma-Aldrich V9131 Cy3 D/M Jackson 715-165-150 Cy3 D/R Jackson 711-165-152 Cy3 D/G Jackson 705-165-147 4 nature portfolio | reporting sum m ary M arch 2021 A488 D/M ThermoFisher A21202 A488 D/R ThermoFisher A21206 A488 D/G ThermoFisher A11055 A647 D/M ThermoFisher A31571 A647 D/R ThermoFisher A31573 A647 D/G ThermoFisher A21447 Validation All antibodies were validated by the manufacturer and were previously used in peer reviewed works. ..

    Article Title: SARS-CoV-2 infection induces DNA damage, through CHK1 degradation and impaired 53BP1 recruitment, and cellular senescence.
    Article Snippet: .. 3 nature portfolio | reporting sum m ary M arch 2021 Materials & experimental systems n/a Involved in the study Antibodies Eukaryotic cell lines Palaeontology and archaeology Animals and other organisms Clinical data Dual use research of concern Methods n/a Involved in the study ChIP-seq Flow cytometry MRI-based neuroimaging Antibodies Antibodies used gH2AX (Ser139) Abcam ab11174 gH2AX (Ser139) Millipore 05-636 53BP1 Bethyl A303-906A 53BP1 Novus NB100-304 ACE2 Abcam ab15348 ATM Abcam ab32420 ATR Santa Cruz sc-1887 Beclin 1 Bethyl A302-566A-T Beta-actin Sigma-Aldrich A2228 BrdU BDbioscience 347580 CD68 Abcam ab125212 CDT1 Cell Signaling #8064 cGAS Cell Signaling #15102 CHK1 Novus NB100-46 CHK1 (2G1D5) Cell Signaling #2360 CHK1 (ST57-09) ThermoFisher MA532180 CHK2 Millipore 05-649 Cleaved Caspase-3 (Asp 175) Cell Signaling 9661 DNA-PK Abcam ab32566 HA-tag Abcam ab236632 Histone H3 Abcam ab10799 Human Cytokeratin 8/18 (EP17/EP30) Dako M3652 ISceI (FL-86) Santa Cruz sc-98269 KAP1 Abcam ab10484 LC3B Sigma-Aldrich L7543 p16 Abcam ab51243 p21 Abcam ab188224 P21 Cell Signaling #2946 P38 MAPK Cell Signaling #9212 P53 Abcam ab1101 p62 Abcam ab240635 pATM (Ser1981) Rockland 200-301-400 pATR (T1989) Abcam ab223258 pCHK1 (S317) Cell Signaling #2344 pCHK2 (Thr68) Cell Signaling #2661 PCNA Bio Rad MCA1558 pDNA-PK (Ser2056) (EPR5670) Abcam ab124918 pKAP1 (S824) Bethyl A300-767A pP38 MAPK (Thr180/Tyr182) Cell Signaling #9211 pP53 (Ser15) Cell Signaling #9284 proSP-C Abcam ab3786 pRPA (S4/S8) Bethyl A300-245A pSTAT1 (Ser 727) Cell Signaling #9177 pSTAT1 (Tyr 701) (58D6) Cell Signaling #9167 RPA Calbiochem NA18-100UG RRM1 Santa Cruz sc-11733 RRM2 Novus NBP1-31661 RRM2 Santa Cruz sc-10844 SARS-CoV2 nucleocapsid Sino Biological 40588-T62 SARS-CoV2 nucleocapsid Sino Biological 40143-R019 SARS-CoV2 nucleocapsid (1A6) ThermoFisher MA5-35941 STAT1 (9H2) Cell Signaling #9176 Strep-tag II epitope Qiagen 34850 Tubulin Sigma-Aldrich T5168 Ubiquitin (P4D1) Santa Cruz sc-8017 Vinculin Sigma-Aldrich V9131 Cy3 D/M Jackson 715-165-150 Cy3 D/R Jackson 711-165-152 Cy3 D/G Jackson 705-165-147 4 nature portfolio | reporting sum m ary M arch 2021 A488 D/M ThermoFisher A21202 A488 D/R ThermoFisher A21206 A488 D/G ThermoFisher A11055 A647 D/M ThermoFisher A31571 A647 D/R ThermoFisher A31573 A647 D/G ThermoFisher A21447 Validation All antibodies were validated by the manufacturer and were previously used in peer reviewed works. ..

    Magnetic Resonance Imaging:

    Article Title:
    Article Snippet: .. If you are not sure if a list item applies to your research, read the appropriate section before selecting a response. ary M arch 2021 Materials & experimental systems n/a Involved in the study Antibodies Eukaryotic cell lines Palaeontology and archaeology Animals and other organisms Clinical data Dual use research of concern Methods n/a Involved in the study ChIP-seq Flow cytometry MRI-based neuroimaging Antibodies Antibodies used gH2AX (Ser139) Abcam ab11174 gH2AX (Ser139) Millipore 05-636 53BP1 Bethyl A303-906A 53BP1 Novus NB100-304 ACE2 Abcam ab15348 ATM Abcam ab32420 ATR Santa Cruz sc-1887 Beclin 1 Bethyl A302-566A-T Beta-actin Sigma-Aldrich A2228 BrdU BDbioscience 347580 CD68 Abcam ab125212 CDT1 Cell Signaling #8064 cGAS Cell Signaling #15102 CHK1 Novus NB100-46 CHK1 (2G1D5) Cell Signaling #2360 CHK1 (ST57-09) ThermoFisher MA532180 CHK2 Millipore 05-649 Cleaved Caspase-3 (Asp 175) Cell Signaling 9661 DNA-PK Abcam ab32566 HA-tag Abcam ab236632 Histone H3 Abcam ab10799 Human Cytokeratin 8/18 (EP17/EP30) Dako M3652 ISceI (FL-86) Santa Cruz sc-98269 KAP1 Abcam ab10484 LC3B Sigma-Aldrich L7543 p16 Abcam ab51243 p21 Abcam ab188224 P21 Cell Signaling #2946 P38 MAPK Cell Signaling #9212 P53 Abcam ab1101 p62 Abcam ab240635 pATM (Ser1981) Rockland 200-301-400 pATR (T1989) Abcam ab223258 pCHK1 (S317) Cell Signaling #2344 pCHK2 (Thr68) Cell Signaling #2661 PCNA Bio Rad MCA1558 pDNA-PK (Ser2056) (EPR5670) Abcam ab124918 pKAP1 (S824) Bethyl A300-767A pP38 MAPK (Thr180/Tyr182) Cell Signaling #9211 pP53 (Ser15) Cell Signaling #9284 proSP-C Abcam ab3786 pRPA (S4/S8) Bethyl A300-245A pSTAT1 (Ser 727) Cell Signaling #9177 pSTAT1 (Tyr 701) (58D6) Cell Signaling #9167 RPA Calbiochem NA18-100UG RRM1 Santa Cruz sc-11733 RRM2 Novus NBP1-31661 RRM2 Santa Cruz sc-10844 SARS-CoV2 nucleocapsid Sino Biological 40588-T62 SARS-CoV2 nucleocapsid Sino Biological 40143-R019 SARS-CoV2 nucleocapsid (1A6) ThermoFisher MA5-35941 STAT1 (9H2) Cell Signaling #9176 Strep-tag II epitope Qiagen 34850 Tubulin Sigma-Aldrich T5168 Ubiquitin (P4D1) Santa Cruz sc-8017 Vinculin Sigma-Aldrich V9131 Cy3 D/M Jackson 715-165-150 Cy3 D/R Jackson 711-165-152 Cy3 D/G Jackson 705-165-147 4 nature portfolio | reporting sum m ary M arch 2021 A488 D/M ThermoFisher A21202 A488 D/R ThermoFisher A21206 A488 D/G ThermoFisher A11055 A647 D/M ThermoFisher A31571 A647 D/R ThermoFisher A31573 A647 D/G ThermoFisher A21447 Validation All antibodies were validated by the manufacturer and were previously used in peer reviewed works. ..

    Article Title: SARS-CoV-2 infection induces DNA damage, through CHK1 degradation and impaired 53BP1 recruitment, and cellular senescence.
    Article Snippet: .. 3 nature portfolio | reporting sum m ary M arch 2021 Materials & experimental systems n/a Involved in the study Antibodies Eukaryotic cell lines Palaeontology and archaeology Animals and other organisms Clinical data Dual use research of concern Methods n/a Involved in the study ChIP-seq Flow cytometry MRI-based neuroimaging Antibodies Antibodies used gH2AX (Ser139) Abcam ab11174 gH2AX (Ser139) Millipore 05-636 53BP1 Bethyl A303-906A 53BP1 Novus NB100-304 ACE2 Abcam ab15348 ATM Abcam ab32420 ATR Santa Cruz sc-1887 Beclin 1 Bethyl A302-566A-T Beta-actin Sigma-Aldrich A2228 BrdU BDbioscience 347580 CD68 Abcam ab125212 CDT1 Cell Signaling #8064 cGAS Cell Signaling #15102 CHK1 Novus NB100-46 CHK1 (2G1D5) Cell Signaling #2360 CHK1 (ST57-09) ThermoFisher MA532180 CHK2 Millipore 05-649 Cleaved Caspase-3 (Asp 175) Cell Signaling 9661 DNA-PK Abcam ab32566 HA-tag Abcam ab236632 Histone H3 Abcam ab10799 Human Cytokeratin 8/18 (EP17/EP30) Dako M3652 ISceI (FL-86) Santa Cruz sc-98269 KAP1 Abcam ab10484 LC3B Sigma-Aldrich L7543 p16 Abcam ab51243 p21 Abcam ab188224 P21 Cell Signaling #2946 P38 MAPK Cell Signaling #9212 P53 Abcam ab1101 p62 Abcam ab240635 pATM (Ser1981) Rockland 200-301-400 pATR (T1989) Abcam ab223258 pCHK1 (S317) Cell Signaling #2344 pCHK2 (Thr68) Cell Signaling #2661 PCNA Bio Rad MCA1558 pDNA-PK (Ser2056) (EPR5670) Abcam ab124918 pKAP1 (S824) Bethyl A300-767A pP38 MAPK (Thr180/Tyr182) Cell Signaling #9211 pP53 (Ser15) Cell Signaling #9284 proSP-C Abcam ab3786 pRPA (S4/S8) Bethyl A300-245A pSTAT1 (Ser 727) Cell Signaling #9177 pSTAT1 (Tyr 701) (58D6) Cell Signaling #9167 RPA Calbiochem NA18-100UG RRM1 Santa Cruz sc-11733 RRM2 Novus NBP1-31661 RRM2 Santa Cruz sc-10844 SARS-CoV2 nucleocapsid Sino Biological 40588-T62 SARS-CoV2 nucleocapsid Sino Biological 40143-R019 SARS-CoV2 nucleocapsid (1A6) ThermoFisher MA5-35941 STAT1 (9H2) Cell Signaling #9176 Strep-tag II epitope Qiagen 34850 Tubulin Sigma-Aldrich T5168 Ubiquitin (P4D1) Santa Cruz sc-8017 Vinculin Sigma-Aldrich V9131 Cy3 D/M Jackson 715-165-150 Cy3 D/R Jackson 711-165-152 Cy3 D/G Jackson 705-165-147 4 nature portfolio | reporting sum m ary M arch 2021 A488 D/M ThermoFisher A21202 A488 D/R ThermoFisher A21206 A488 D/G ThermoFisher A11055 A647 D/M ThermoFisher A31571 A647 D/R ThermoFisher A31573 A647 D/G ThermoFisher A21447 Validation All antibodies were validated by the manufacturer and were previously used in peer reviewed works. ..

    Recombinase Polymerase Amplification:

    Article Title:
    Article Snippet: .. If you are not sure if a list item applies to your research, read the appropriate section before selecting a response. ary M arch 2021 Materials & experimental systems n/a Involved in the study Antibodies Eukaryotic cell lines Palaeontology and archaeology Animals and other organisms Clinical data Dual use research of concern Methods n/a Involved in the study ChIP-seq Flow cytometry MRI-based neuroimaging Antibodies Antibodies used gH2AX (Ser139) Abcam ab11174 gH2AX (Ser139) Millipore 05-636 53BP1 Bethyl A303-906A 53BP1 Novus NB100-304 ACE2 Abcam ab15348 ATM Abcam ab32420 ATR Santa Cruz sc-1887 Beclin 1 Bethyl A302-566A-T Beta-actin Sigma-Aldrich A2228 BrdU BDbioscience 347580 CD68 Abcam ab125212 CDT1 Cell Signaling #8064 cGAS Cell Signaling #15102 CHK1 Novus NB100-46 CHK1 (2G1D5) Cell Signaling #2360 CHK1 (ST57-09) ThermoFisher MA532180 CHK2 Millipore 05-649 Cleaved Caspase-3 (Asp 175) Cell Signaling 9661 DNA-PK Abcam ab32566 HA-tag Abcam ab236632 Histone H3 Abcam ab10799 Human Cytokeratin 8/18 (EP17/EP30) Dako M3652 ISceI (FL-86) Santa Cruz sc-98269 KAP1 Abcam ab10484 LC3B Sigma-Aldrich L7543 p16 Abcam ab51243 p21 Abcam ab188224 P21 Cell Signaling #2946 P38 MAPK Cell Signaling #9212 P53 Abcam ab1101 p62 Abcam ab240635 pATM (Ser1981) Rockland 200-301-400 pATR (T1989) Abcam ab223258 pCHK1 (S317) Cell Signaling #2344 pCHK2 (Thr68) Cell Signaling #2661 PCNA Bio Rad MCA1558 pDNA-PK (Ser2056) (EPR5670) Abcam ab124918 pKAP1 (S824) Bethyl A300-767A pP38 MAPK (Thr180/Tyr182) Cell Signaling #9211 pP53 (Ser15) Cell Signaling #9284 proSP-C Abcam ab3786 pRPA (S4/S8) Bethyl A300-245A pSTAT1 (Ser 727) Cell Signaling #9177 pSTAT1 (Tyr 701) (58D6) Cell Signaling #9167 RPA Calbiochem NA18-100UG RRM1 Santa Cruz sc-11733 RRM2 Novus NBP1-31661 RRM2 Santa Cruz sc-10844 SARS-CoV2 nucleocapsid Sino Biological 40588-T62 SARS-CoV2 nucleocapsid Sino Biological 40143-R019 SARS-CoV2 nucleocapsid (1A6) ThermoFisher MA5-35941 STAT1 (9H2) Cell Signaling #9176 Strep-tag II epitope Qiagen 34850 Tubulin Sigma-Aldrich T5168 Ubiquitin (P4D1) Santa Cruz sc-8017 Vinculin Sigma-Aldrich V9131 Cy3 D/M Jackson 715-165-150 Cy3 D/R Jackson 711-165-152 Cy3 D/G Jackson 705-165-147 4 nature portfolio | reporting sum m ary M arch 2021 A488 D/M ThermoFisher A21202 A488 D/R ThermoFisher A21206 A488 D/G ThermoFisher A11055 A647 D/M ThermoFisher A31571 A647 D/R ThermoFisher A31573 A647 D/G ThermoFisher A21447 Validation All antibodies were validated by the manufacturer and were previously used in peer reviewed works. ..

    Article Title: SARS-CoV-2 infection induces DNA damage, through CHK1 degradation and impaired 53BP1 recruitment, and cellular senescence.
    Article Snippet: .. 3 nature portfolio | reporting sum m ary M arch 2021 Materials & experimental systems n/a Involved in the study Antibodies Eukaryotic cell lines Palaeontology and archaeology Animals and other organisms Clinical data Dual use research of concern Methods n/a Involved in the study ChIP-seq Flow cytometry MRI-based neuroimaging Antibodies Antibodies used gH2AX (Ser139) Abcam ab11174 gH2AX (Ser139) Millipore 05-636 53BP1 Bethyl A303-906A 53BP1 Novus NB100-304 ACE2 Abcam ab15348 ATM Abcam ab32420 ATR Santa Cruz sc-1887 Beclin 1 Bethyl A302-566A-T Beta-actin Sigma-Aldrich A2228 BrdU BDbioscience 347580 CD68 Abcam ab125212 CDT1 Cell Signaling #8064 cGAS Cell Signaling #15102 CHK1 Novus NB100-46 CHK1 (2G1D5) Cell Signaling #2360 CHK1 (ST57-09) ThermoFisher MA532180 CHK2 Millipore 05-649 Cleaved Caspase-3 (Asp 175) Cell Signaling 9661 DNA-PK Abcam ab32566 HA-tag Abcam ab236632 Histone H3 Abcam ab10799 Human Cytokeratin 8/18 (EP17/EP30) Dako M3652 ISceI (FL-86) Santa Cruz sc-98269 KAP1 Abcam ab10484 LC3B Sigma-Aldrich L7543 p16 Abcam ab51243 p21 Abcam ab188224 P21 Cell Signaling #2946 P38 MAPK Cell Signaling #9212 P53 Abcam ab1101 p62 Abcam ab240635 pATM (Ser1981) Rockland 200-301-400 pATR (T1989) Abcam ab223258 pCHK1 (S317) Cell Signaling #2344 pCHK2 (Thr68) Cell Signaling #2661 PCNA Bio Rad MCA1558 pDNA-PK (Ser2056) (EPR5670) Abcam ab124918 pKAP1 (S824) Bethyl A300-767A pP38 MAPK (Thr180/Tyr182) Cell Signaling #9211 pP53 (Ser15) Cell Signaling #9284 proSP-C Abcam ab3786 pRPA (S4/S8) Bethyl A300-245A pSTAT1 (Ser 727) Cell Signaling #9177 pSTAT1 (Tyr 701) (58D6) Cell Signaling #9167 RPA Calbiochem NA18-100UG RRM1 Santa Cruz sc-11733 RRM2 Novus NBP1-31661 RRM2 Santa Cruz sc-10844 SARS-CoV2 nucleocapsid Sino Biological 40588-T62 SARS-CoV2 nucleocapsid Sino Biological 40143-R019 SARS-CoV2 nucleocapsid (1A6) ThermoFisher MA5-35941 STAT1 (9H2) Cell Signaling #9176 Strep-tag II epitope Qiagen 34850 Tubulin Sigma-Aldrich T5168 Ubiquitin (P4D1) Santa Cruz sc-8017 Vinculin Sigma-Aldrich V9131 Cy3 D/M Jackson 715-165-150 Cy3 D/R Jackson 711-165-152 Cy3 D/G Jackson 705-165-147 4 nature portfolio | reporting sum m ary M arch 2021 A488 D/M ThermoFisher A21202 A488 D/R ThermoFisher A21206 A488 D/G ThermoFisher A11055 A647 D/M ThermoFisher A31571 A647 D/R ThermoFisher A31573 A647 D/G ThermoFisher A21447 Validation All antibodies were validated by the manufacturer and were previously used in peer reviewed works. ..

    Strep-tag:

    Article Title:
    Article Snippet: .. If you are not sure if a list item applies to your research, read the appropriate section before selecting a response. ary M arch 2021 Materials & experimental systems n/a Involved in the study Antibodies Eukaryotic cell lines Palaeontology and archaeology Animals and other organisms Clinical data Dual use research of concern Methods n/a Involved in the study ChIP-seq Flow cytometry MRI-based neuroimaging Antibodies Antibodies used gH2AX (Ser139) Abcam ab11174 gH2AX (Ser139) Millipore 05-636 53BP1 Bethyl A303-906A 53BP1 Novus NB100-304 ACE2 Abcam ab15348 ATM Abcam ab32420 ATR Santa Cruz sc-1887 Beclin 1 Bethyl A302-566A-T Beta-actin Sigma-Aldrich A2228 BrdU BDbioscience 347580 CD68 Abcam ab125212 CDT1 Cell Signaling #8064 cGAS Cell Signaling #15102 CHK1 Novus NB100-46 CHK1 (2G1D5) Cell Signaling #2360 CHK1 (ST57-09) ThermoFisher MA532180 CHK2 Millipore 05-649 Cleaved Caspase-3 (Asp 175) Cell Signaling 9661 DNA-PK Abcam ab32566 HA-tag Abcam ab236632 Histone H3 Abcam ab10799 Human Cytokeratin 8/18 (EP17/EP30) Dako M3652 ISceI (FL-86) Santa Cruz sc-98269 KAP1 Abcam ab10484 LC3B Sigma-Aldrich L7543 p16 Abcam ab51243 p21 Abcam ab188224 P21 Cell Signaling #2946 P38 MAPK Cell Signaling #9212 P53 Abcam ab1101 p62 Abcam ab240635 pATM (Ser1981) Rockland 200-301-400 pATR (T1989) Abcam ab223258 pCHK1 (S317) Cell Signaling #2344 pCHK2 (Thr68) Cell Signaling #2661 PCNA Bio Rad MCA1558 pDNA-PK (Ser2056) (EPR5670) Abcam ab124918 pKAP1 (S824) Bethyl A300-767A pP38 MAPK (Thr180/Tyr182) Cell Signaling #9211 pP53 (Ser15) Cell Signaling #9284 proSP-C Abcam ab3786 pRPA (S4/S8) Bethyl A300-245A pSTAT1 (Ser 727) Cell Signaling #9177 pSTAT1 (Tyr 701) (58D6) Cell Signaling #9167 RPA Calbiochem NA18-100UG RRM1 Santa Cruz sc-11733 RRM2 Novus NBP1-31661 RRM2 Santa Cruz sc-10844 SARS-CoV2 nucleocapsid Sino Biological 40588-T62 SARS-CoV2 nucleocapsid Sino Biological 40143-R019 SARS-CoV2 nucleocapsid (1A6) ThermoFisher MA5-35941 STAT1 (9H2) Cell Signaling #9176 Strep-tag II epitope Qiagen 34850 Tubulin Sigma-Aldrich T5168 Ubiquitin (P4D1) Santa Cruz sc-8017 Vinculin Sigma-Aldrich V9131 Cy3 D/M Jackson 715-165-150 Cy3 D/R Jackson 711-165-152 Cy3 D/G Jackson 705-165-147 4 nature portfolio | reporting sum m ary M arch 2021 A488 D/M ThermoFisher A21202 A488 D/R ThermoFisher A21206 A488 D/G ThermoFisher A11055 A647 D/M ThermoFisher A31571 A647 D/R ThermoFisher A31573 A647 D/G ThermoFisher A21447 Validation All antibodies were validated by the manufacturer and were previously used in peer reviewed works. ..

    Article Title: SARS-CoV-2 infection induces DNA damage, through CHK1 degradation and impaired 53BP1 recruitment, and cellular senescence.
    Article Snippet: .. 3 nature portfolio | reporting sum m ary M arch 2021 Materials & experimental systems n/a Involved in the study Antibodies Eukaryotic cell lines Palaeontology and archaeology Animals and other organisms Clinical data Dual use research of concern Methods n/a Involved in the study ChIP-seq Flow cytometry MRI-based neuroimaging Antibodies Antibodies used gH2AX (Ser139) Abcam ab11174 gH2AX (Ser139) Millipore 05-636 53BP1 Bethyl A303-906A 53BP1 Novus NB100-304 ACE2 Abcam ab15348 ATM Abcam ab32420 ATR Santa Cruz sc-1887 Beclin 1 Bethyl A302-566A-T Beta-actin Sigma-Aldrich A2228 BrdU BDbioscience 347580 CD68 Abcam ab125212 CDT1 Cell Signaling #8064 cGAS Cell Signaling #15102 CHK1 Novus NB100-46 CHK1 (2G1D5) Cell Signaling #2360 CHK1 (ST57-09) ThermoFisher MA532180 CHK2 Millipore 05-649 Cleaved Caspase-3 (Asp 175) Cell Signaling 9661 DNA-PK Abcam ab32566 HA-tag Abcam ab236632 Histone H3 Abcam ab10799 Human Cytokeratin 8/18 (EP17/EP30) Dako M3652 ISceI (FL-86) Santa Cruz sc-98269 KAP1 Abcam ab10484 LC3B Sigma-Aldrich L7543 p16 Abcam ab51243 p21 Abcam ab188224 P21 Cell Signaling #2946 P38 MAPK Cell Signaling #9212 P53 Abcam ab1101 p62 Abcam ab240635 pATM (Ser1981) Rockland 200-301-400 pATR (T1989) Abcam ab223258 pCHK1 (S317) Cell Signaling #2344 pCHK2 (Thr68) Cell Signaling #2661 PCNA Bio Rad MCA1558 pDNA-PK (Ser2056) (EPR5670) Abcam ab124918 pKAP1 (S824) Bethyl A300-767A pP38 MAPK (Thr180/Tyr182) Cell Signaling #9211 pP53 (Ser15) Cell Signaling #9284 proSP-C Abcam ab3786 pRPA (S4/S8) Bethyl A300-245A pSTAT1 (Ser 727) Cell Signaling #9177 pSTAT1 (Tyr 701) (58D6) Cell Signaling #9167 RPA Calbiochem NA18-100UG RRM1 Santa Cruz sc-11733 RRM2 Novus NBP1-31661 RRM2 Santa Cruz sc-10844 SARS-CoV2 nucleocapsid Sino Biological 40588-T62 SARS-CoV2 nucleocapsid Sino Biological 40143-R019 SARS-CoV2 nucleocapsid (1A6) ThermoFisher MA5-35941 STAT1 (9H2) Cell Signaling #9176 Strep-tag II epitope Qiagen 34850 Tubulin Sigma-Aldrich T5168 Ubiquitin (P4D1) Santa Cruz sc-8017 Vinculin Sigma-Aldrich V9131 Cy3 D/M Jackson 715-165-150 Cy3 D/R Jackson 711-165-152 Cy3 D/G Jackson 705-165-147 4 nature portfolio | reporting sum m ary M arch 2021 A488 D/M ThermoFisher A21202 A488 D/R ThermoFisher A21206 A488 D/G ThermoFisher A11055 A647 D/M ThermoFisher A31571 A647 D/R ThermoFisher A31573 A647 D/G ThermoFisher A21447 Validation All antibodies were validated by the manufacturer and were previously used in peer reviewed works. ..

    Ubiquitin Proteomics:

    Article Title:
    Article Snippet: .. If you are not sure if a list item applies to your research, read the appropriate section before selecting a response. ary M arch 2021 Materials & experimental systems n/a Involved in the study Antibodies Eukaryotic cell lines Palaeontology and archaeology Animals and other organisms Clinical data Dual use research of concern Methods n/a Involved in the study ChIP-seq Flow cytometry MRI-based neuroimaging Antibodies Antibodies used gH2AX (Ser139) Abcam ab11174 gH2AX (Ser139) Millipore 05-636 53BP1 Bethyl A303-906A 53BP1 Novus NB100-304 ACE2 Abcam ab15348 ATM Abcam ab32420 ATR Santa Cruz sc-1887 Beclin 1 Bethyl A302-566A-T Beta-actin Sigma-Aldrich A2228 BrdU BDbioscience 347580 CD68 Abcam ab125212 CDT1 Cell Signaling #8064 cGAS Cell Signaling #15102 CHK1 Novus NB100-46 CHK1 (2G1D5) Cell Signaling #2360 CHK1 (ST57-09) ThermoFisher MA532180 CHK2 Millipore 05-649 Cleaved Caspase-3 (Asp 175) Cell Signaling 9661 DNA-PK Abcam ab32566 HA-tag Abcam ab236632 Histone H3 Abcam ab10799 Human Cytokeratin 8/18 (EP17/EP30) Dako M3652 ISceI (FL-86) Santa Cruz sc-98269 KAP1 Abcam ab10484 LC3B Sigma-Aldrich L7543 p16 Abcam ab51243 p21 Abcam ab188224 P21 Cell Signaling #2946 P38 MAPK Cell Signaling #9212 P53 Abcam ab1101 p62 Abcam ab240635 pATM (Ser1981) Rockland 200-301-400 pATR (T1989) Abcam ab223258 pCHK1 (S317) Cell Signaling #2344 pCHK2 (Thr68) Cell Signaling #2661 PCNA Bio Rad MCA1558 pDNA-PK (Ser2056) (EPR5670) Abcam ab124918 pKAP1 (S824) Bethyl A300-767A pP38 MAPK (Thr180/Tyr182) Cell Signaling #9211 pP53 (Ser15) Cell Signaling #9284 proSP-C Abcam ab3786 pRPA (S4/S8) Bethyl A300-245A pSTAT1 (Ser 727) Cell Signaling #9177 pSTAT1 (Tyr 701) (58D6) Cell Signaling #9167 RPA Calbiochem NA18-100UG RRM1 Santa Cruz sc-11733 RRM2 Novus NBP1-31661 RRM2 Santa Cruz sc-10844 SARS-CoV2 nucleocapsid Sino Biological 40588-T62 SARS-CoV2 nucleocapsid Sino Biological 40143-R019 SARS-CoV2 nucleocapsid (1A6) ThermoFisher MA5-35941 STAT1 (9H2) Cell Signaling #9176 Strep-tag II epitope Qiagen 34850 Tubulin Sigma-Aldrich T5168 Ubiquitin (P4D1) Santa Cruz sc-8017 Vinculin Sigma-Aldrich V9131 Cy3 D/M Jackson 715-165-150 Cy3 D/R Jackson 711-165-152 Cy3 D/G Jackson 705-165-147 4 nature portfolio | reporting sum m ary M arch 2021 A488 D/M ThermoFisher A21202 A488 D/R ThermoFisher A21206 A488 D/G ThermoFisher A11055 A647 D/M ThermoFisher A31571 A647 D/R ThermoFisher A31573 A647 D/G ThermoFisher A21447 Validation All antibodies were validated by the manufacturer and were previously used in peer reviewed works. ..

    Article Title: SARS-CoV-2 infection induces DNA damage, through CHK1 degradation and impaired 53BP1 recruitment, and cellular senescence.
    Article Snippet: .. 3 nature portfolio | reporting sum m ary M arch 2021 Materials & experimental systems n/a Involved in the study Antibodies Eukaryotic cell lines Palaeontology and archaeology Animals and other organisms Clinical data Dual use research of concern Methods n/a Involved in the study ChIP-seq Flow cytometry MRI-based neuroimaging Antibodies Antibodies used gH2AX (Ser139) Abcam ab11174 gH2AX (Ser139) Millipore 05-636 53BP1 Bethyl A303-906A 53BP1 Novus NB100-304 ACE2 Abcam ab15348 ATM Abcam ab32420 ATR Santa Cruz sc-1887 Beclin 1 Bethyl A302-566A-T Beta-actin Sigma-Aldrich A2228 BrdU BDbioscience 347580 CD68 Abcam ab125212 CDT1 Cell Signaling #8064 cGAS Cell Signaling #15102 CHK1 Novus NB100-46 CHK1 (2G1D5) Cell Signaling #2360 CHK1 (ST57-09) ThermoFisher MA532180 CHK2 Millipore 05-649 Cleaved Caspase-3 (Asp 175) Cell Signaling 9661 DNA-PK Abcam ab32566 HA-tag Abcam ab236632 Histone H3 Abcam ab10799 Human Cytokeratin 8/18 (EP17/EP30) Dako M3652 ISceI (FL-86) Santa Cruz sc-98269 KAP1 Abcam ab10484 LC3B Sigma-Aldrich L7543 p16 Abcam ab51243 p21 Abcam ab188224 P21 Cell Signaling #2946 P38 MAPK Cell Signaling #9212 P53 Abcam ab1101 p62 Abcam ab240635 pATM (Ser1981) Rockland 200-301-400 pATR (T1989) Abcam ab223258 pCHK1 (S317) Cell Signaling #2344 pCHK2 (Thr68) Cell Signaling #2661 PCNA Bio Rad MCA1558 pDNA-PK (Ser2056) (EPR5670) Abcam ab124918 pKAP1 (S824) Bethyl A300-767A pP38 MAPK (Thr180/Tyr182) Cell Signaling #9211 pP53 (Ser15) Cell Signaling #9284 proSP-C Abcam ab3786 pRPA (S4/S8) Bethyl A300-245A pSTAT1 (Ser 727) Cell Signaling #9177 pSTAT1 (Tyr 701) (58D6) Cell Signaling #9167 RPA Calbiochem NA18-100UG RRM1 Santa Cruz sc-11733 RRM2 Novus NBP1-31661 RRM2 Santa Cruz sc-10844 SARS-CoV2 nucleocapsid Sino Biological 40588-T62 SARS-CoV2 nucleocapsid Sino Biological 40143-R019 SARS-CoV2 nucleocapsid (1A6) ThermoFisher MA5-35941 STAT1 (9H2) Cell Signaling #9176 Strep-tag II epitope Qiagen 34850 Tubulin Sigma-Aldrich T5168 Ubiquitin (P4D1) Santa Cruz sc-8017 Vinculin Sigma-Aldrich V9131 Cy3 D/M Jackson 715-165-150 Cy3 D/R Jackson 711-165-152 Cy3 D/G Jackson 705-165-147 4 nature portfolio | reporting sum m ary M arch 2021 A488 D/M ThermoFisher A21202 A488 D/R ThermoFisher A21206 A488 D/G ThermoFisher A11055 A647 D/M ThermoFisher A31571 A647 D/R ThermoFisher A31573 A647 D/G ThermoFisher A21447 Validation All antibodies were validated by the manufacturer and were previously used in peer reviewed works. ..

    Biomarker Discovery:

    Article Title:
    Article Snippet: .. If you are not sure if a list item applies to your research, read the appropriate section before selecting a response. ary M arch 2021 Materials & experimental systems n/a Involved in the study Antibodies Eukaryotic cell lines Palaeontology and archaeology Animals and other organisms Clinical data Dual use research of concern Methods n/a Involved in the study ChIP-seq Flow cytometry MRI-based neuroimaging Antibodies Antibodies used gH2AX (Ser139) Abcam ab11174 gH2AX (Ser139) Millipore 05-636 53BP1 Bethyl A303-906A 53BP1 Novus NB100-304 ACE2 Abcam ab15348 ATM Abcam ab32420 ATR Santa Cruz sc-1887 Beclin 1 Bethyl A302-566A-T Beta-actin Sigma-Aldrich A2228 BrdU BDbioscience 347580 CD68 Abcam ab125212 CDT1 Cell Signaling #8064 cGAS Cell Signaling #15102 CHK1 Novus NB100-46 CHK1 (2G1D5) Cell Signaling #2360 CHK1 (ST57-09) ThermoFisher MA532180 CHK2 Millipore 05-649 Cleaved Caspase-3 (Asp 175) Cell Signaling 9661 DNA-PK Abcam ab32566 HA-tag Abcam ab236632 Histone H3 Abcam ab10799 Human Cytokeratin 8/18 (EP17/EP30) Dako M3652 ISceI (FL-86) Santa Cruz sc-98269 KAP1 Abcam ab10484 LC3B Sigma-Aldrich L7543 p16 Abcam ab51243 p21 Abcam ab188224 P21 Cell Signaling #2946 P38 MAPK Cell Signaling #9212 P53 Abcam ab1101 p62 Abcam ab240635 pATM (Ser1981) Rockland 200-301-400 pATR (T1989) Abcam ab223258 pCHK1 (S317) Cell Signaling #2344 pCHK2 (Thr68) Cell Signaling #2661 PCNA Bio Rad MCA1558 pDNA-PK (Ser2056) (EPR5670) Abcam ab124918 pKAP1 (S824) Bethyl A300-767A pP38 MAPK (Thr180/Tyr182) Cell Signaling #9211 pP53 (Ser15) Cell Signaling #9284 proSP-C Abcam ab3786 pRPA (S4/S8) Bethyl A300-245A pSTAT1 (Ser 727) Cell Signaling #9177 pSTAT1 (Tyr 701) (58D6) Cell Signaling #9167 RPA Calbiochem NA18-100UG RRM1 Santa Cruz sc-11733 RRM2 Novus NBP1-31661 RRM2 Santa Cruz sc-10844 SARS-CoV2 nucleocapsid Sino Biological 40588-T62 SARS-CoV2 nucleocapsid Sino Biological 40143-R019 SARS-CoV2 nucleocapsid (1A6) ThermoFisher MA5-35941 STAT1 (9H2) Cell Signaling #9176 Strep-tag II epitope Qiagen 34850 Tubulin Sigma-Aldrich T5168 Ubiquitin (P4D1) Santa Cruz sc-8017 Vinculin Sigma-Aldrich V9131 Cy3 D/M Jackson 715-165-150 Cy3 D/R Jackson 711-165-152 Cy3 D/G Jackson 705-165-147 4 nature portfolio | reporting sum m ary M arch 2021 A488 D/M ThermoFisher A21202 A488 D/R ThermoFisher A21206 A488 D/G ThermoFisher A11055 A647 D/M ThermoFisher A31571 A647 D/R ThermoFisher A31573 A647 D/G ThermoFisher A21447 Validation All antibodies were validated by the manufacturer and were previously used in peer reviewed works. ..

    Article Title: SARS-CoV-2 infection induces DNA damage, through CHK1 degradation and impaired 53BP1 recruitment, and cellular senescence.
    Article Snippet: .. 3 nature portfolio | reporting sum m ary M arch 2021 Materials & experimental systems n/a Involved in the study Antibodies Eukaryotic cell lines Palaeontology and archaeology Animals and other organisms Clinical data Dual use research of concern Methods n/a Involved in the study ChIP-seq Flow cytometry MRI-based neuroimaging Antibodies Antibodies used gH2AX (Ser139) Abcam ab11174 gH2AX (Ser139) Millipore 05-636 53BP1 Bethyl A303-906A 53BP1 Novus NB100-304 ACE2 Abcam ab15348 ATM Abcam ab32420 ATR Santa Cruz sc-1887 Beclin 1 Bethyl A302-566A-T Beta-actin Sigma-Aldrich A2228 BrdU BDbioscience 347580 CD68 Abcam ab125212 CDT1 Cell Signaling #8064 cGAS Cell Signaling #15102 CHK1 Novus NB100-46 CHK1 (2G1D5) Cell Signaling #2360 CHK1 (ST57-09) ThermoFisher MA532180 CHK2 Millipore 05-649 Cleaved Caspase-3 (Asp 175) Cell Signaling 9661 DNA-PK Abcam ab32566 HA-tag Abcam ab236632 Histone H3 Abcam ab10799 Human Cytokeratin 8/18 (EP17/EP30) Dako M3652 ISceI (FL-86) Santa Cruz sc-98269 KAP1 Abcam ab10484 LC3B Sigma-Aldrich L7543 p16 Abcam ab51243 p21 Abcam ab188224 P21 Cell Signaling #2946 P38 MAPK Cell Signaling #9212 P53 Abcam ab1101 p62 Abcam ab240635 pATM (Ser1981) Rockland 200-301-400 pATR (T1989) Abcam ab223258 pCHK1 (S317) Cell Signaling #2344 pCHK2 (Thr68) Cell Signaling #2661 PCNA Bio Rad MCA1558 pDNA-PK (Ser2056) (EPR5670) Abcam ab124918 pKAP1 (S824) Bethyl A300-767A pP38 MAPK (Thr180/Tyr182) Cell Signaling #9211 pP53 (Ser15) Cell Signaling #9284 proSP-C Abcam ab3786 pRPA (S4/S8) Bethyl A300-245A pSTAT1 (Ser 727) Cell Signaling #9177 pSTAT1 (Tyr 701) (58D6) Cell Signaling #9167 RPA Calbiochem NA18-100UG RRM1 Santa Cruz sc-11733 RRM2 Novus NBP1-31661 RRM2 Santa Cruz sc-10844 SARS-CoV2 nucleocapsid Sino Biological 40588-T62 SARS-CoV2 nucleocapsid Sino Biological 40143-R019 SARS-CoV2 nucleocapsid (1A6) ThermoFisher MA5-35941 STAT1 (9H2) Cell Signaling #9176 Strep-tag II epitope Qiagen 34850 Tubulin Sigma-Aldrich T5168 Ubiquitin (P4D1) Santa Cruz sc-8017 Vinculin Sigma-Aldrich V9131 Cy3 D/M Jackson 715-165-150 Cy3 D/R Jackson 711-165-152 Cy3 D/G Jackson 705-165-147 4 nature portfolio | reporting sum m ary M arch 2021 A488 D/M ThermoFisher A21202 A488 D/R ThermoFisher A21206 A488 D/G ThermoFisher A11055 A647 D/M ThermoFisher A31571 A647 D/R ThermoFisher A31573 A647 D/G ThermoFisher A21447 Validation All antibodies were validated by the manufacturer and were previously used in peer reviewed works. ..



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    Figure 2. The expression of CAS9 in hiPSCs and hESCs promotes DNA DSB damage. (A) The inducible expression of CAS9 promotes DNA DSB damage responses in hiPSCs after 2 µg/mL Doxy treatment. The relative levels of the phosphorylation of p53 and H2AX are indicated at the bottom. Consistent data were obtained from two independent experiments. (B) The impact of expression levels of CAS9 on DNA DSB damage in hESCs. At the same lentiviral titers, the expression levels of CAS9 in hESCs transduced by standard lentiviral vector are higher than those transduced by the inducible lentiviral vector after 2 µg/mL Doxy treatment. Much lower expression levels of CAS9 can also promote DNA DSB damage in hESCs after the treatment with lower dosages of Doxy. The relative levels of the phosphorylation of p53 and H2AX are indicated at the bottom.

    Journal: Protein & cell

    Article Title: CAS9 is a genome mutator by directly disrupting DNA-PK dependent DNA repair pathway.

    doi: 10.1007/s13238-020-00699-6

    Figure Lengend Snippet: Figure 2. The expression of CAS9 in hiPSCs and hESCs promotes DNA DSB damage. (A) The inducible expression of CAS9 promotes DNA DSB damage responses in hiPSCs after 2 µg/mL Doxy treatment. The relative levels of the phosphorylation of p53 and H2AX are indicated at the bottom. Consistent data were obtained from two independent experiments. (B) The impact of expression levels of CAS9 on DNA DSB damage in hESCs. At the same lentiviral titers, the expression levels of CAS9 in hESCs transduced by standard lentiviral vector are higher than those transduced by the inducible lentiviral vector after 2 µg/mL Doxy treatment. Much lower expression levels of CAS9 can also promote DNA DSB damage in hESCs after the treatment with lower dosages of Doxy. The relative levels of the phosphorylation of p53 and H2AX are indicated at the bottom.

    Article Snippet: Antibodies used in this study Antibody Source and catalog Anti-γH2AX Cell signaling (9718S, 80312S) Anti-H2AX Cell signaling (7631S) Anti-p53 Santa Cruze (sc-126) Anti-pp53 Cell signaling (9286S) Anti-CHK1 Cell signaling (2360S) Anti-pCHK1 Cell signaling (12302S) Anti-H3 Abcam (ab1971) Anti-KU86 Santa Cruze (sc-5280), Abcam (ab119935), Cell signaling (2753s) Anti-KU70 Abcam (ab92450) Anti-DNA PKcs Abcam (ab70250) Anti-BRCA1 Cell signaling (14823S) Anti-p-BRCA1 Cell signaling (9009S) Anti-CHK2 Cell signaling (6334S) Anti-pCHK2 Cell signaling (2197S) Anti-CAS9 Cell signaling (14697S), Abcam (ab189380), Novus Biologicals (NBP2-52717) (NBP2-52717) Anti-β-actin Cell signaling (4970S) Anti-Flag Thermo Fisher (MA1-91878) Anti-α-tubulin Santa Cruze (sc-73242) © The Author(s) 2020 357 P ro te in & C e ll D ow nloaded from https://academ ic.oup.com /proteincell/article/11/5/352/6746752 by guest on 21 January 2024 150 kDa 250 kDa 250 kDa 55 kDa 55 kDa 55 kDa 55 kDa 55 kDa 55 kDa 15 kDa 15 kDa 37 kDa Fo ci n um be r o f γ H 2A X *** DAPI H2AX CAS9 Merge pCHK2 (Thr68) CHK2 H2AX γH2AX β-Actin Doxy CHK1 pCHK1 (Ser317) pBRCA1 (Ser1254) CAS9 BRCA1 pS15-p53 p53 R at io o f i nt en si ty * ** ** ** *** *** *** CTL Doxy Ta il le ng th *** *** *** A B C 0 h 24 h 48 h - D ox y + D ox y -D ox y +D ox y0 10 20 30 40 Dox Doxy + Dox0 h 24 h 48 h 0 1 2 pB RA C1 /B RA C1 pC HK 1/ CH K1 pC HK 2/ CH K2 γH 2A X/ H2 AX pp 53 /p 53 3 0 10 20 30 40 CT L D ox y Do x Do xy + D ox P ro te in & C e ll D ow nloaded from https://academ ic.oup.com /proteincell/article/11/5/352/6746752 by guest on 21 January 2024 incubated with secondary antibodies at room temperature for 1 h and detected with Supersignal West Pico or Dura exposure buffer (Thermo Fisher Scientific).

    Techniques: Expressing, Phospho-proteomics, Plasmid Preparation

    Figure 3. The expression of CAS9 in human fibroblasts promotes DNA DSB damage and activates DNA damage response pathways. (A) The expression of CAS9 in human fibroblasts activates DNA damage responses. The expression of CAS9 was induced with 2 µg/mL Doxy treatment. The relative levels of phosphorylation of BRCA1, CHK1, CHK2 and p53 are indicated at the bottom. n = 3. Data are presented as mean value ± SD. *P < 0.05, **P < 0.01, ***P < 0.001. (B) The expression of CAS9 increased the number of γH2AX foci in human fibroblasts. CTL or CAS9, human fibroblasts with CAS9 inducible expression cassette plated on chamber slides were treated with or without 2 µg/mL doxycycline for 3 days. The expression of CAS9 and γH2AX foci was revealed by immunoflourescence analysis. Representative images are shown. Scale bar, 10 µm. Unpaired t test. n = 20. Data are presented as mean values ± SD. ***P < 0.001. (C) CAS9 induces DNA DSB damage in human fibroblasts. CTL, human fibroblasts with lentiviral empty vector were treated with 2 µg/mL doxycycline for three days; Doxy, Dox, Doxy + Dox, human fibroblasts with lentiviral CAS9 inducible expression vector were treated with 2 µg/mL doxycycline for 3 days or 0.5 µmol/L Dox for 2 h or 2 µg/mL doxycycline for three days + 0.5 µmol/L Dox for 2 h, respectively. Representative images are shown. n = 40. Unpaired t test. Data are presented as mean value ± SD. **P < 0.01.

    Journal: Protein & cell

    Article Title: CAS9 is a genome mutator by directly disrupting DNA-PK dependent DNA repair pathway.

    doi: 10.1007/s13238-020-00699-6

    Figure Lengend Snippet: Figure 3. The expression of CAS9 in human fibroblasts promotes DNA DSB damage and activates DNA damage response pathways. (A) The expression of CAS9 in human fibroblasts activates DNA damage responses. The expression of CAS9 was induced with 2 µg/mL Doxy treatment. The relative levels of phosphorylation of BRCA1, CHK1, CHK2 and p53 are indicated at the bottom. n = 3. Data are presented as mean value ± SD. *P < 0.05, **P < 0.01, ***P < 0.001. (B) The expression of CAS9 increased the number of γH2AX foci in human fibroblasts. CTL or CAS9, human fibroblasts with CAS9 inducible expression cassette plated on chamber slides were treated with or without 2 µg/mL doxycycline for 3 days. The expression of CAS9 and γH2AX foci was revealed by immunoflourescence analysis. Representative images are shown. Scale bar, 10 µm. Unpaired t test. n = 20. Data are presented as mean values ± SD. ***P < 0.001. (C) CAS9 induces DNA DSB damage in human fibroblasts. CTL, human fibroblasts with lentiviral empty vector were treated with 2 µg/mL doxycycline for three days; Doxy, Dox, Doxy + Dox, human fibroblasts with lentiviral CAS9 inducible expression vector were treated with 2 µg/mL doxycycline for 3 days or 0.5 µmol/L Dox for 2 h or 2 µg/mL doxycycline for three days + 0.5 µmol/L Dox for 2 h, respectively. Representative images are shown. n = 40. Unpaired t test. Data are presented as mean value ± SD. **P < 0.01.

    Article Snippet: Antibodies used in this study Antibody Source and catalog Anti-γH2AX Cell signaling (9718S, 80312S) Anti-H2AX Cell signaling (7631S) Anti-p53 Santa Cruze (sc-126) Anti-pp53 Cell signaling (9286S) Anti-CHK1 Cell signaling (2360S) Anti-pCHK1 Cell signaling (12302S) Anti-H3 Abcam (ab1971) Anti-KU86 Santa Cruze (sc-5280), Abcam (ab119935), Cell signaling (2753s) Anti-KU70 Abcam (ab92450) Anti-DNA PKcs Abcam (ab70250) Anti-BRCA1 Cell signaling (14823S) Anti-p-BRCA1 Cell signaling (9009S) Anti-CHK2 Cell signaling (6334S) Anti-pCHK2 Cell signaling (2197S) Anti-CAS9 Cell signaling (14697S), Abcam (ab189380), Novus Biologicals (NBP2-52717) (NBP2-52717) Anti-β-actin Cell signaling (4970S) Anti-Flag Thermo Fisher (MA1-91878) Anti-α-tubulin Santa Cruze (sc-73242) © The Author(s) 2020 357 P ro te in & C e ll D ow nloaded from https://academ ic.oup.com /proteincell/article/11/5/352/6746752 by guest on 21 January 2024 150 kDa 250 kDa 250 kDa 55 kDa 55 kDa 55 kDa 55 kDa 55 kDa 55 kDa 15 kDa 15 kDa 37 kDa Fo ci n um be r o f γ H 2A X *** DAPI H2AX CAS9 Merge pCHK2 (Thr68) CHK2 H2AX γH2AX β-Actin Doxy CHK1 pCHK1 (Ser317) pBRCA1 (Ser1254) CAS9 BRCA1 pS15-p53 p53 R at io o f i nt en si ty * ** ** ** *** *** *** CTL Doxy Ta il le ng th *** *** *** A B C 0 h 24 h 48 h - D ox y + D ox y -D ox y +D ox y0 10 20 30 40 Dox Doxy + Dox0 h 24 h 48 h 0 1 2 pB RA C1 /B RA C1 pC HK 1/ CH K1 pC HK 2/ CH K2 γH 2A X/ H2 AX pp 53 /p 53 3 0 10 20 30 40 CT L D ox y Do x Do xy + D ox P ro te in & C e ll D ow nloaded from https://academ ic.oup.com /proteincell/article/11/5/352/6746752 by guest on 21 January 2024 incubated with secondary antibodies at room temperature for 1 h and detected with Supersignal West Pico or Dura exposure buffer (Thermo Fisher Scientific).

    Techniques: Expressing, Phospho-proteomics, Plasmid Preparation